rfhg_193966.1

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Basic information about the TSS


TSS ID:rfhg_193966.1
TSS ID(Version3):hg_160972.1
Species:human
Chr:chr17
Start:42609641
End:42609730
Strand:+
Source datasetsFANTOM5|PRJNA4843412|DRA013844|PRJNA548673|PRJNA401781
|PRJNA597322|PRJNA615891|PRJDB5282
ProtocolCAGE|NETCAGE|ReCappable-seq|RAMPAGE|oligo_capping
|STRIPE-seq|SLIC_CAGE|TIF-seq2|C1CAGE
TSS cluster detected*12

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2932859,EH38E1863726)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000681490.1:0
ENST00000681947.1:0
ENST00000680678.1:0
ENST00000681413.1:0
ENST00000680672.1:0
ENST00000588056.2:0
ENST00000251413.8:0
ENST00000591509.5:0
ENST00000589688.2:0
ENST00000589613.1:0
AK313339:0
BC000619:0
M61764:0
AK311637:0
GeneID:7283
HGNC/MGI_ID:HGNC:12417
UniProt_ID:K7EIS0 K7EKE5 P23258
Nearer transcript ids and distances:
  • ENST00000680617.1:5
  • ENST00000681919.1:5
  • ENST00000681114.1:5
  • KJ892331:6
  • CR407642:8
  • BT019931:8
  • DQ891925:8
  • DQ895110:8
  • L77579:15
  • LF384804:-301
  • MA620381:-301
view more...
Gene_name:tubulin gamma 1
Gene_symbol:TUBG1
Gene_synonyms:TUBGCP1
Gene_source:HGNC:12417



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:NM_001070
Entrez ID:7283
Nearest Unigene:Hs.279669
Nearest Refseq:NM_001070
Nearest Ensembl:ENSG00000131462
Gene Name:tubulin gamma 1
Gene Alias:CDCBM4|GCP-1|TUBG|TUBGCP1
Gene Type:protein-coding
CpG%:0.157303
GC%:0.755556
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.