rfhg_195184.1

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Basic information about the TSS


TSS ID:rfhg_195184.1
Species:human
Chr:chr17
Start:48596835
End:48596843
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2938629,EH38E1868205)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF327469:-212
MA563046:-212
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000470193.3:-291
  • LF327470:343
  • MA563047:343
  • LF327468:-404
  • MA563045:-404
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:881
Nearest PromoterID:NR_033205
Entrez ID:404266
Nearest Unigene:Hs.660088
Nearest Refseq:NR_033201
Nearest Ensembl:ENSG00000233101
Gene Name:
Gene Alias:-
Gene Type:ncRNA
CpG%:0.000000
GC%:0.555556
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):