rfhg_198067.1

Basic information about the TSS

TSS ID:	rfhg_198067.1
TSS ID(Version3):	hg_167865.1 hg_167864.1
Species:	human
Chr:	chr17

Start:	72592733
End:	72592812
Strand:	-

Source datasets

FANTOM5|PRJNA548673|PRJNA4843412|DRA013844

Protocol

CAGE|ReCappable-seq|NETCAGE

TSS cluster detected^*

5

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2959860,EH38E1883578)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000648631.1:0 ENST00000649614.1:0 ENST00000453722.6:0 ENST00000648623.2:0 ENST00000649350.1:0 ENST00000648054.1:0 AK000477:0 KR778895:0 KR778896:0 KR778900:0 AK129763:0
GeneID:	100499467 400619
HGNC/MGI_ID:	HGNC:43564 HGNC:44354
UniProt_ID:
Nearer transcript ids and distances:	ENST00000650131.2:-17 ENST00000649793.2:-40 ENST00000650419.1:41 ENST00000581801.6:41 ENST00000650476.1:41 ENST00000648088.1:41 ENST00000650227.1:41 ENST00000649250.1:41 ENST00000647953.1:41 ENST00000649343.1:41 ENST00000650423.1:41 ENST00000650570.1:41 ENST00000650161.1:41 ENST00000648954.1:41 ENST00000649936.1:41 ENST00000649407.1:41 ENST00000648428.1:60 ENST00000648248.1:297 ENST00000650482.1:365 LQ718466:419 view more...

Gene_name:	long intergenic non-protein coding RNA 511; long intergenic non-protein coding RNA 673
Gene_symbol:	LINC00511 LINC00673
Gene_synonyms:	ERRLR01 HI-LNC75 SLNCR1 onco-lncRNA-12
Gene_source:	HGNC:43564 HGNC:44354

TATA-Box annotation

Distance to TSS:	32
Nearest PromoterID:	NR_036488
Entrez ID:	100499467
Nearest Unigene:	Hs.157726
Nearest Refseq:	NR_036488
Nearest Ensembl:	ENSG00000227036
Gene Name:	long intergenic non-protein coding RNA 511; long intergenic non-protein coding RNA 673
Gene Alias:	ERRLR01\|HI-LNC75\|HILNC75\|LUCAIR1\|SLNCR\|SLNCR1
Gene Type:	ncRNA
CpG%:	0.164557
GC%:	0.750000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "ENST00000650131.2:-17 ENST00000649793.2:-40 ENST00000650419.1:41 ENST00000581801.6:41 ENST00000650476.1:41 ENST00000648088.1:41 ENST00000650227.1:41 ENST00000649250.1:41 ENST00000647953.1:41 ENST00000649343.1:41 ENST00000650423.1:41 ENST00000650570.1:41 ENST00000650161.1:41 ENST00000648954.1:41 ENST00000649936.1:41 ENST00000649407.1:41 ENST00000648428.1:60 ENST00000648248.1:297 ENST00000650482.1:365 LQ718466:419" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.