rfhg_198122.1

Basic information about the TSS

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TSS ID: rfhg_198122.1 TSS ID(Version3): hg_162566.1 Species: human Chr: chr17		Start: 73193026 End: 73193071 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|PRJNA548673|PRJNA615891|PRJNA401781 |PRJNA4843412|DRA013844|PRJDB5282
Protocol	CAGE|TSS_database|ReCappable-seq|SLIC_CAGE|RAMPAGE |oligo_capping|NETCAGE|TIF-seq2|C1CAGE
TSS cluster detected*	13

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2960511,EH38E1884028)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000299886.9:0 AK098224:0 DQ896029:0 AB462989:0 BC021985:0 GeneID: 9382 HGNC/MGI_ID: HGNC:6545 UniProt_ID: B3KUY5 Q8WTW3 Nearer transcript ids and distances: ENST00000438720.7:1 AB037802:1 ENST00000582587.2:22 ENST00000618996.4:-394 BC047465:-394 view more...

Gene_name: component of oligomeric golgi complex 1 Gene_symbol: COG1 Gene_synonyms: KIAA1381 Gene_source: HGNC:6545

TATA-Box annotation

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Distance to TSS:	-7
Nearest PromoterID:	NM_018714
Entrez ID:	9382
Nearest Unigene:	Hs.103555
Nearest Refseq:	NM_018714
Nearest Ensembl:	ENSG00000166685
Gene Name:	component of oligomeric golgi complex 1
Gene Alias:	CDG2G|LDLB
Gene Type:	protein-coding
CpG%:	0.088889
GC%:	0.586957
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.