rfhg_198383.1
From referenceTSS
Basic information about the TSS
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Source datasets | FANTOM5|PRJNA4843412|DRA013844|PRJNA597322|PRJNA401781 |PRJNA548673|PRJNA615891 | |||||||||||||||
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Protocol | CAGE|NETCAGE|STRIPE-seq|ReCappable-seq|SLIC_CAGE|TIF-seq2 | |||||||||||||||
TSS cluster detected* | 9 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | PLS,CTCF-bound (EH38D2962213,EH38E1885192) |
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Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 17 |
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Nearest PromoterID: | NM_004252 |
Entrez ID: | 9368 |
Nearest Unigene: | Hs.724482 |
Nearest Refseq: | NM_004252 |
Nearest Ensembl: | ENSG00000109062 |
Gene Name: | NHERF family PDZ scaffold protein 1 |
Gene Alias: | EBP50|NHERF|NHERF-1|NHERF1|NPHLOP2 |
Gene Type: | protein-coding |
CpG%: | 0.134615 |
GC%: | 0.735849 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.