rfhg_198383.1

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Basic information about the TSS


TSS ID:rfhg_198383.1
TSS ID(Version3):hg_162657.1
hg_162658.1
Species:human
Chr:chr17
Start:74748619
End:74748671
Strand:+
Source datasetsFANTOM5|PRJNA4843412|DRA013844|PRJNA597322|PRJNA401781
|PRJNA548673|PRJNA615891
ProtocolCAGE|NETCAGE|STRIPE-seq|ReCappable-seq|SLIC_CAGE|TIF-seq2
TSS cluster detected*9

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2962213,EH38E1885192)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000262613.10:0
ENST00000583369.5:0
AK312498:0
AK094467:0
AK128474:0
AK026581:0
BC049220:0
BC003361:0
AF015926:0
BC011777:0
BC053350:0
BC001443:0
GeneID:9368
HGNC/MGI_ID:HGNC:11075
UniProt_ID:B2R6A3 B3KSV9 J3QRP6 O14745
Nearer transcript ids and distances:
  • ENST00000581999.1:-6
  • NR_037409.1:-6
  • LG052434:-6
  • AF036241:12
  • AB528945:176
  • KJ892757:176
  • KR709325:176
  • KR709326:176
view more...
Gene_name:NHERF family PDZ scaffold protein 1
Gene_symbol:NHERF1
Gene_synonyms:EBP50 NHE-RF NHERF NHERF-1
Gene_source:HGNC:11075



TATA-Box annotation


Distance to TSS:17
Nearest PromoterID:NM_004252
Entrez ID:9368
Nearest Unigene:Hs.724482
Nearest Refseq:NM_004252
Nearest Ensembl:ENSG00000109062
Gene Name:NHERF family PDZ scaffold protein 1
Gene Alias:EBP50|NHERF|NHERF-1|NHERF1|NPHLOP2
Gene Type:protein-coding
CpG%:0.134615
GC%:0.735849
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.