rfhg_198448.1
From referenceTSS
Basic information about the TSS
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| Source datasets | PRJNA4843412|DRA013844|PRJNA401781|PRJNA548673|PRJNA615891 | |||||||||||||
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| Protocol | NETCAGE|CAGE|ReCappable-seq|SLIC_CAGE|TIF-seq2 | |||||||||||||
| TSS cluster detected* | 7 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2962528,EH38E1885454) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -6 |
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| Nearest PromoterID: | NM_014603 |
| Entrez ID: | 30850 |
| Nearest Unigene: | Hs.78358 |
| Nearest Refseq: | NM_014603 |
| Nearest Ensembl: | ENSG00000109089 |
| Gene Name: | cerebellar degeneration related protein 2 like |
| Gene Alias: | HUMPPA |
| Gene Type: | protein-coding |
| CpG%: | 0.129032 |
| GC%: | 0.776596 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.