rfhg_198590.1

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Basic information about the TSS


TSS ID:rfhg_198590.1
Species:human
Chr:chr17
Start:75633714
End:75633748
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2963304,EH38E1886122)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF209421:143
MA444998:143
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000581115.1:-268
  • ENST00000375215.3:-280
  • NM_001162995.3:-280
  • BC027861:-280
  • LP896058:-280
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:297
Nearest PromoterID:NM_001162995
Entrez ID:643008
Nearest Unigene:Hs.528605
Nearest Refseq:NM_001162995
Nearest Ensembl:ENSG00000204323
Gene Name:
Gene Alias:C17orf109|PP12104
Gene Type:protein-coding
CpG%:0.029412
GC%:0.685714
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):