rfhg_199010.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_199010.1
Species:human
Chr:chr17
Start:76969174
End:76969216
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2965025,EH38E1887558)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NR_136417.1:0
NR_136416.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000564292.5:18
  • ENST00000563583.1:77
  • ENST00000625040.1:-314
  • AK123869:-314
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:4
Nearest PromoterID:NR_136416
Entrez ID:105371899
Nearest Unigene:Hs.634683
Nearest Refseq:NR_136416
Nearest Ensembl:ENSG00000267568
Gene Name:
Gene Alias:-
Gene Type:ncRNA
CpG%:0.071429
GC%:0.511628
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):