rfhg_199213.1

Basic information about the TSS

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TSS ID: rfhg_199213.1 TSS ID(Version3): hg_168350.1 hg_236925.1 Species: human Chr: chr17		Start: 78187020 End: 78187091 Strand: -
Source datasets	DBTSS|ENCODE|PRJNA4843412|PRJNA548673|DRA013844|PRJNA401781 |PRJNA615891|PRJDB5282|PRJNA597322
Protocol	TSS-seq|CAGE|NETCAGE|RAMPAGE|oligo_capping|ReCappable-seq |SLIC_CAGE|TIF-seq2|C1CAGE|STRIPE-seq
TSS cluster detected*	13

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2966642,EH38E1888827)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000301634.12:0 ENST00000590862.5:0 ENST00000590430.5:0 ENST00000586613.1:0 ENST00000592126.1:0 BC007872:0 BC007986:0 GQ891524:0 BC006484:0 K02581:0 AK314950:0 GeneID: 7083 HGNC/MGI_ID: HGNC:11830 UniProt_ID: A0A384MDV9 K7ENW5 K7ERJ1 K7ES52 Nearer transcript ids and distances: AB591021:22 KJ892281:26 KJ897675:26 KJ905330:26 AB451268:26 BT006941:26 AB451395:26 NM_001363848.1:-113 ENST00000588734.5:-142 view more...

Gene_name: thymidine kinase 1 Gene_symbol: TK1 Gene_synonyms: Gene_source: HGNC:11830

TATA-Box annotation

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Distance to TSS:	-3
Nearest PromoterID:	NM_003258
Entrez ID:	7083
Nearest Unigene:	Hs.515122
Nearest Refseq:	NM_003258
Nearest Ensembl:	ENSG00000167900
Gene Name:	thymidine kinase 1
Gene Alias:	TK2
Gene Type:	protein-coding
CpG%:	0.126761
GC%:	0.652778
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.