rfhg_201154.1

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Basic information about the TSS


TSS ID:rfhg_201154.1
Species:human
Chr:chr18
Start:5630028
End:5630035
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2977481,EH38E1897000)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC144531:-159
GeneID:100286986
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:atrophin-domain containing
    Gene_symbol:LOC100286986
    Gene_synonyms:
    Gene_source:EntrezGene:100286986



    TATA-Box annotation


    Distance to TSS:-1040
    Nearest PromoterID:NM_001281535
    Entrez ID:23136
    Nearest Unigene:Hs.213394
    Nearest Refseq:NM_012307
    Nearest Ensembl:ENSG00000082397
    Gene Name:atrophin-domain containing
    Gene Alias:4.1B|DAL-1|DAL1
    Gene Type:protein-coding
    CpG%:0.142857
    GC%:0.625000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.