rfhg_203334.1

Basic information about the TSS

TSS ID:	rfhg_203334.1
Species:	human
Chr:	chr18

Start:	51030204
End:	51030270
Strand:	+

Source datasets

PRJNA4843412|DRA013844|PRJNA401781|PRJNA548673|PRJNA615891

Protocol

NETCAGE|CAGE|ReCappable-seq|SLIC_CAGE

TSS cluster detected^*

6

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D3008565,EH38E1916832)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000590061.1:0 ENST00000342988.8:0 AK290770:0 BC002379:0
GeneID:	4089
HGNC/MGI_ID:	HGNC:6770
UniProt_ID:	A0A024R274 K7EIJ2
Nearer transcript ids and distances:	ENST00000589076.5:-104 ENST00000592911.5:327 view more...

Gene_name:	SMAD family member 4
Gene_symbol:	SMAD4
Gene_synonyms:	DPC4
Gene_source:	HGNC:6770

TATA-Box annotation

Distance to TSS:	24
Nearest PromoterID:	NM_005359
Entrez ID:	4089
Nearest Unigene:	Hs.75862
Nearest Refseq:	NM_005359
Nearest Ensembl:	ENSG00000141646
Gene Name:	SMAD family member 4
Gene Alias:	DPC4\|JIP\|MADH4\|MYHRS
Gene Type:	protein-coding
CpG%:	0.136364
GC%:	0.656716
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.