rfhg_20358.1

Basic information about the TSS

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TSS ID: rfhg_20358.1 Species: human Chr: chr1		Start: 224114086 End: 224114134 Strand: +
Source datasets	PRJNA4843412|DRA013844|PRJNA615891|PRJNA597322|PRJNA401781 |PRJNA548673
Protocol	NETCAGE|CAGE|SLIC_CAGE|STRIPE-seq|ReCappable-seq |oligo_capping|TIF-seq2
TSS cluster detected*	9

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2282601,EH38E1426272)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000424254.6:0 ENST00000366862.10:0 ENST00000523990.1:0 AK307892:0 AK001628:0 BC031576:0 AK303381:0 CU689186:0 JF432118:0 GeneID: 23219 HGNC/MGI_ID: HGNC:29046 UniProt_ID: B4E0H5 Q9NVF7 Nearer transcript ids and distances: ENST00000483773.1:37 ENST00000519894.1:84 AB007952:202 view more...

Gene_name: F-box protein 28 Gene_symbol: FBXO28 Gene_synonyms: CENP-30 FLJ10766 Fbx28 KIAA0483 Gene_source: HGNC:29046

TATA-Box annotation

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Distance to TSS:	-1
Nearest PromoterID:	NM_001136115
Entrez ID:	23219
Nearest Unigene:	Hs.64691
Nearest Refseq:	NM_015176
Nearest Ensembl:	ENSG00000143756
Gene Name:	F-box protein 28
Gene Alias:	CENP-30|Fbx28
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.591837
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.