rfhg_204213.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_204213.1
TSS ID(Version3):hg_170707.1
Species:human
Chr:chr18
Start:69400834
End:69400920
Strand:+
Source datasetsFANTOM5|PRJNA4843412|DRA013844
ProtocolCAGE|NETCAGE
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D3021940,EH38E1924999)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000382713.10:0
GeneID:220164
HGNC/MGI_ID:HGNC:28301
UniProt_ID:Q6PKX4
Nearer transcript ids and distances:
  • LF212753:-86
  • MA448330:-86
  • LF213431:114
  • MA449008:114
  • AY599248:135
  • BC096744:135
  • AB528935:322
  • LF344125:-451
  • MA579702:-451
view more...
Gene_name:docking protein 6
Gene_symbol:DOK6
Gene_synonyms:HsT3226 MGC20785
Gene_source:HGNC:28301



TATA-Box annotation


Distance to TSS:-11
Nearest PromoterID:NM_152721
Entrez ID:220164
Nearest Unigene:Hs.278285
Nearest Refseq:NM_152721
Nearest Ensembl:ENSG00000206052
Gene Name:docking protein 6
Gene Alias:DOK5L|HsT3226
Gene Type:protein-coding
CpG%:0.162791
GC%:0.850575
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.