rfhg_204347.1

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Basic information about the TSS


TSS ID:rfhg_204347.1
TSS ID(Version3):hg_237175.1
Species:human
Chr:chr18
Start:73264439
End:73264502
Strand:-
Source datasetsDRA000914|PRJDB5282|PRJNA4843412|DRA013844|PRJNA548673
|PRJNA615891|PRJNA401781
ProtocolCAGE|C1CAGE|NETCAGE|TIF-seq2|oligo_capping|ReCappable-seq
|SLIC_CAGE|RAMPAGE
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D3024117,EH38E1926137)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000581011.5:0
ENST00000581862.6:0
ENST00000661525.1:0
ENST00000583405.5:0
ENST00000582571.2:0
ENST00000667943.1:0
ENST00000654686.1:0
ENST00000584671.1:0
BC013370:0
BC047643:0
GeneID:400655
HGNC/MGI_ID:HGNC:54480
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000669547.1:92
  • ENST00000584544.5:136
  • BC034583:136
view more...
Gene_name:long intergenic non-protein coding RNA 2864
Gene_symbol:LINC02864
Gene_synonyms:RP11-169F17.1
Gene_source:HGNC:54480



TATA-Box annotation


Distance to TSS:28
Nearest PromoterID:NR_034133
Entrez ID:400655
Nearest Unigene:Hs.579378
Nearest Refseq:NR_034133
Nearest Ensembl:ENSG00000263711
Gene Name:long intergenic non-protein coding RNA 2864
Gene Alias:-
Gene Type:ncRNA
CpG%:0.063492
GC%:0.656250
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.