rfhg_205095.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_205095.1
Species:human
Chr:chr19
Start:893456
End:893468
Strand:+
Source datasetsPRJNA548673
ProtocolReCappable-seq
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3031177,EH38E1930518)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000384776.1:16
GeneID:101954271
HGNC/MGI_ID:HGNC:34269
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RNA, U6 small nuclear 9
    Gene_symbol:RNU6-9
    Gene_synonyms:U6-9
    Gene_source:HGNC:34269



    TATA-Box annotation


    Distance to TSS:-22
    Nearest PromoterID:NR_004394
    Entrez ID:26827
    Nearest Unigene:
    Nearest Refseq:NR_004394
    Nearest Ensembl:ENSG00000206625
    Gene Name:RNA, U6 small nuclear 9
    Gene Alias:RNU6|RNU6A|U6|U6-1
    Gene Type:snRNA
    CpG%:0.000000
    GC%:0.461538
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.