rfhg_205328.1

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Basic information about the TSS


TSS ID:rfhg_205328.1
TSS ID(Version3):hg_178017.1
Species:human
Chr:chr19
Start:1401486
End:1401571
Strand:-
Source datasetsFANTOM5|EPD|PRJNA4843412|DRA013844|PRJNA615891|PRJNA597322
|PRJNA401781|PRJNA548673
ProtocolCAGE|TSS_database|NETCAGE|SLIC_CAGE|TIF-seq2|STRIPE-seq
|ReCappable-seq
TSS cluster detected*9

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3031966,EH38E1931233)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000252288.8:0
ENST00000640762.1:0
ENST00000447102.8:0
BC017936:0
BC016760:0
AK297487:0
Z49878:0
AK289465:0
GeneID:2593
HGNC/MGI_ID:HGNC:4136
UniProt_ID:A0A1W2PR36 B4DMJ3 Q14353 V9HWB2
Nearer transcript ids and distances:
  • CU677713:8
  • KJ891220:8
  • KR710231:8
  • KR710232:8
  • KR710233:8
  • KR710234:8
  • AB590862:9
  • BT007034:10
  • EU794612:10
view more...
Gene_name:guanidinoacetate N-methyltransferase
Gene_symbol:GAMT
Gene_synonyms:PIG2 TP53I2
Gene_source:HGNC:4136



TATA-Box annotation


Distance to TSS:14
Nearest PromoterID:NM_000156
Entrez ID:2593
Nearest Unigene:Hs.81131
Nearest Refseq:NM_000156
Nearest Ensembl:ENSG00000130005
Gene Name:guanidinoacetate N-methyltransferase
Gene Alias:CCDS2|HEL-S-20|PIG2|TP53I2
Gene Type:protein-coding
CpG%:0.152941
GC%:0.802326
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.