rfhg_206396.1

Basic information about the TSS

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TSS ID: rfhg_206396.1 TSS ID(Version3): hg_178552.1 Species: human Chr: chr19		Start: 5622736 End: 5622863 Strand: -
Source datasets	FANTOM5|EPD|DRA000914|RAMPAGE|PRJNA548673|PRJNA615891 |PRJNA401781|PRJNA597322|DRA013844|PRJNA4843412
Protocol	CAGE|TSS_database|RAMPAGE|ReCappable-seq|SLIC_CAGE|TIF-seq2 |STRIPE-seq|oligo_capping|NETCAGE
TSS cluster detected*	14

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3036772,EH38E1935133)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000252542.9:0 ENST00000591120.1:0 D50928:0 BC025279:0 BC014784:0 BC001216:0 AK296552:0 AK300501:0 GeneID: 9667 HGNC/MGI_ID: HGNC:21605 UniProt_ID: A0PJ47 B4DU53 Q14151 Nearer transcript ids and distances: AB463241:21 KJ902004:21 view more...

Gene_name: scaffold attachment factor B2 Gene_symbol: SAFB2 Gene_synonyms: KIAA0138 Gene_source: HGNC:21605

TATA-Box annotation

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Distance to TSS:	-23
Nearest PromoterID:	NM_014649
Entrez ID:	9667
Nearest Unigene:	Hs.655392
Nearest Refseq:	NM_014649
Nearest Ensembl:	ENSG00000130254
Gene Name:	scaffold attachment factor B2
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.149606
GC%:	0.671875
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.