rfhg_207254.1

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Basic information about the TSS


TSS ID:rfhg_207254.1
TSS ID(Version3):hg_179019.1
Species:human
Chr:chr19
Start:9621197
End:9621248
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|PRJNA615891|PRJNA401781|PRJNA548673
|PRJDB5282|PRJNA4843412|DRA013844
ProtocolCAGE|TSS_database|TIF-seq2|SLIC_CAGE|RAMPAGE|oligo_capping
|ReCappable-seq|C1CAGE|NETCAGE
TSS cluster detected*13

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3040011,EH38E1937703)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000444802.5:0
ENST00000424629.5:0
ENST00000302851.8:0
ENST00000326044.9:0
ENST00000444611.5:0
ENST00000443819.5:0
ENST00000465974.5:0
ENST00000457965.5:0
ENST00000444519.5:0
ENST00000421525.5:0
ENST00000470932.5:0
ENST00000435550.5:0
ENST00000471053.5:0
ENST00000480167.5:0
ENST00000490893.5:0
ENST00000485150.1:0
ENST00000497409.1:0
AK122974:0
BC032668:0
AK293004:0
AK304383:0
GeneID:93134
HGNC/MGI_ID:HGNC:28684
UniProt_ID:A8KAD9 C9IZJ4 C9J7U2 C9JQP3 F2Z3H5 F8W7U5 F8WAU2 F8WBU1 Q8N587
Nearer transcript ids and distances:
  • ENST00000495503.5:2
  • ENST00000479943.5:9
view more...
Gene_name:zinc finger protein 561
Gene_symbol:ZNF561
Gene_synonyms:MGC45408
Gene_source:HGNC:28684



TATA-Box annotation


Distance to TSS:10
Nearest PromoterID:NM_001330365
Entrez ID:93134
Nearest Unigene:Hs.720081
Nearest Refseq:NM_152289
Nearest Ensembl:ENSG00000171469
Gene Name:zinc finger protein 561
Gene Alias:-
Gene Type:protein-coding
CpG%:0.117647
GC%:0.653846
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.