rfhg_20746.1

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Basic information about the TSS


TSS ID:rfhg_20746.1
Species:human
Chr:chr1
Start:228140050
End:228140050
Strand:+
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2286251,EH38E1428854)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001242839.1:34
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000366730.5:-88
  • ENST00000462807.5:178
  • ENST00000391865.7:178
  • LF384736:178
  • MA620313:178
  • ENST00000493209.5:215
  • ENST00000485838.5:216
  • AK303845:225
  • ENST00000469973.1:229
  • ENST00000312726.9:229
  • NM_001242840.3:229
  • NM_001159390.2:229
  • NM_000858.7:229
  • ENST00000485083.5:232
  • ENST00000366726.5:239
  • ENST00000492871.5:240
  • ENST00000366728.6:240
  • BC006249:240
  • ENST00000453943.5:248
  • ENST00000366723.5:252
  • ENST00000493138.5:257
  • BC091480:258
  • BC009914:266
  • ENST00000366722.5:267
  • ENST00000498092.5:268
  • ENST00000435153.5:268
  • BC069001:280
  • ENST00000366721.5:282
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-34
Nearest PromoterID:NM_001242839
Entrez ID:2987
Nearest Unigene:Hs.376933
Nearest Refseq:NM_000858
Nearest Ensembl:ENSG00000143774
Gene Name:
Gene Alias:GMK
Gene Type:protein-coding
CpG%:0.000000
GC%:1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "ENST00000366730.5:-88 ENST00000462807.5:178 ENST00000391865.7:178 LF384736:178 MA620313:178 ENST00000493209.5:215 ENST00000485838.5:216 AK303845:225 ENST00000469973.1:229 ENST00000312726.9:229 NM_001242840.3:229 NM_001159390.2:229 NM_000858.7:229 ENST00000485083.5:232 ENST00000366726.5:239 ENST00000492871.5:240 ENST00000366728.6:240 BC006249:240 ENST00000453943.5:248 ENST00000366723.5:252 ENST00000493138.5:257 BC091480:258 BC009914:266 ENST00000366722.5:267 ENST00000498092.5:268 ENST00000435153.5:268 BC069001:280 ENST00000366721.5:282" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.