rfhg_207885.1

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Basic information about the TSS


TSS ID:rfhg_207885.1
Species:human
Chr:chr19
Start:11887902
End:11887912
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3042134,EH38E1939500)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:KJ892410:11
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • EU446913:12
  • ENST00000340180.5:-47
  • BC051309:-47
  • ENST00000445911.5:-84
  • ENST00000429654.7:-120
  • NM_001364731.1:-120
  • NM_001364730.1:-120
  • NM_021915.4:-120
  • NM_001321163.2:-120
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:125
Nearest PromoterID:NM_001321163
Entrez ID:7620
Nearest Unigene:Hs.565280
Nearest Refseq:NM_021915
Nearest Ensembl:ENSG00000198429
Gene Name:
Gene Alias:Cos5|hZNF3
Gene Type:protein-coding
CpG%:0.000000
GC%:0.545455
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):