rfhg_20814.1

Basic information about the TSS

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TSS ID: rfhg_20814.1 TSS ID(Version3): hg_17845.1 Species: human Chr: chr1		Start: 228457839 End: 228457908 Strand: -
Source datasets	FANTOM5|EPD|ENCODE|PRJNA401781|PRJNA615891|PRJNA548673 |PRJNA4843412|DRA013844|PRJNA597322|PRJDB5282
Protocol	CAGE|TSS_database|oligo_capping|SLIC_CAGE|TIF-seq2 |ReCappable-seq|NETCAGE|RAMPAGE|STRIPE-seq|C1CAGE
TSS cluster detected*	14

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2286746,EH38E1429156)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000366695.3:0 BC082269:0 BC001193:0 AK311930:0 GeneID: 92815 HGNC/MGI_ID: HGNC:20507 UniProt_ID: Q7L7L0 Nearer transcript ids and distances: KJ895197:22 AB590632:22 view more...

Gene_name: H2A clustered histone 25 Gene_symbol: H2AC25 Gene_synonyms: MGC3165 Gene_source: HGNC:20507

TATA-Box annotation

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Distance to TSS:	-14
Nearest PromoterID:	NM_033445
Entrez ID:	92815
Nearest Unigene:	Hs.26331
Nearest Refseq:	NM_033445
Nearest Ensembl:	ENSG00000181218
Gene Name:	H2A clustered histone 25
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.057971
GC%:	0.514286
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.