rfhg_20833.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_20833.1
Species:human
Chr:chr1
Start:228628214
End:228628220
Strand:-
Source datasetsPRJNA597322
ProtocolSTRIPE-seq
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000364451.1:-46
GeneID:100169760
HGNC/MGI_ID:HGNC:34370
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RNA, 5S ribosomal 9
    Gene_symbol:RNA5S9
    Gene_synonyms:
    Gene_source:HGNC:34370



    TATA-Box annotation


    Distance to TSS:49
    Nearest PromoterID:NR_023371
    Entrez ID:100169760
    Nearest Unigene:
    Nearest Refseq:NR_023371
    Nearest Ensembl:ENSG00000201321
    Gene Name:RNA, 5S ribosomal 9
    Gene Alias:RN5S9
    Gene Type:rRNA
    CpG%:0.000000
    GC%:0.571429
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.