rfhg_209019.1

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Basic information about the TSS


TSS ID:rfhg_209019.1
TSS ID(Version3):hg_174431.1
Species:human
Chr:chr19
Start:16496337
End:16496430
Strand:+
Source datasetsFANTOM5|EPD|PRJNA548673|PRJNA401781|PRJNA615891
|PRJNA4843412|DRA013844
ProtocolCAGE|TSS_database|ReCappable-seq|RAMPAGE|oligo_capping
|SLIC_CAGE|NETCAGE|TIF-seq2
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3046219,EH38E1942659)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000594035.5:0
ENST00000221671.8:0
ENST00000596592.5:0
AK297781:0
AK311324:0
AK225118:0
AK225678:0
AK025395:0
GeneID:84167
HGNC/MGI_ID:HGNC:26141
UniProt_ID:B4DN63 M0QZ23 M0R2B3 Q9H6X5
Nearer transcript ids and distances:
  • ENST00000593380.1:9
  • BC027869:9
  • ENST00000599550.1:26
  • ENST00000594813.1:33
view more...
Gene_name:chromosome 19 open reading frame 44
Gene_symbol:C19orf44
Gene_synonyms:FLJ21742
Gene_source:HGNC:26141



TATA-Box annotation


Distance to TSS:-11
Nearest PromoterID:NM_032207
Entrez ID:84167
Nearest Unigene:Hs.631627
Nearest Refseq:NM_032207
Nearest Ensembl:ENSG00000105072
Gene Name:chromosome 19 open reading frame 44
Gene Alias:-
Gene Type:protein-coding
CpG%:0.064516
GC%:0.617021
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.