rfhg_209062.1

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Basic information about the TSS


TSS ID:rfhg_209062.1
TSS ID(Version3):hg_174446.1
Species:human
Chr:chr19
Start:16829375
End:16829426
Strand:+
Source datasetsFANTOM5|EPD|PRJNA4843412|DRA013844|PRJNA401781|PRJNA615891
|PRJNA548673
ProtocolCAGE|TSS_database|NETCAGE|SLIC_CAGE|TIF-seq2|ReCappable-seq
TSS cluster detected*9

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3046518,EH38E1942907)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000248054.10:0
ENST00000596802.5:0
ENST00000379803.5:0
AB014600:0
BC063531:0
AY706204:0
BC110821:0
AB463259:0
BC172412:0
BC025026:0
GeneID:23309
HGNC/MGI_ID:HGNC:19354
UniProt_ID:O75182
Nearer transcript ids and distances:
    Gene_name:SIN3 transcription regulator family member B
    Gene_symbol:SIN3B
    Gene_synonyms:KIAA0700
    Gene_source:HGNC:19354



    TATA-Box annotation


    Distance to TSS:2
    Nearest PromoterID:NM_001297595
    Entrez ID:23309
    Nearest Unigene:Hs.13999
    Nearest Refseq:NM_015260
    Nearest Ensembl:ENSG00000127511
    Gene Name:SIN3 transcription regulator family member B
    Gene Alias:-
    Gene Type:protein-coding
    CpG%:0.156863
    GC%:0.788462
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.