rfhg_210301.1

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Basic information about the TSS


TSS ID:rfhg_210301.1
TSS ID(Version3):hg_174970.1
Species:human
Chr:chr19
Start:27793443
End:27793503
Strand:+
Source datasetsFANTOM5|PRJNA4843412|DRA013844|PRJDB5282|PRJNA401781
|PRJNA548673|PRJNA615891
ProtocolCAGE|NETCAGE|C1CAGE|oligo_capping|RAMPAGE|ReCappable-seq
|SLIC_CAGE|TIF-seq2
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3051855,EH38E1946954)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC024732:0
GeneID:101927151
HGNC/MGI_ID:HGNC:56093
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000585917.6:-12
  • ENST00000666789.1:-12
  • NR_110689.2:-12
  • NR_110691.2:-12
  • NR_110688.2:-12
  • NR_146735.1:-12
  • NR_146734.1:-12
  • NR_146733.1:-12
  • ENST00000669503.1:392
  • NR_110690.1:392
  • NR_110687.1:392
  • NR_146736.1:392
  • ENST00000668186.1:465
  • ENST00000669909.1:498
view more...
Gene_name:long intergenic non-protein coding RNA 2987
Gene_symbol:LINC02987
Gene_synonyms:
Gene_source:HGNC:56093



TATA-Box annotation


Distance to TSS:42
Nearest PromoterID:NR_110691
Entrez ID:101927151
Nearest Unigene:Hs.567934
Nearest Refseq:NR_110687
Nearest Ensembl:ENSG00000267575
Gene Name:long intergenic non-protein coding RNA 2987
Gene Alias:-
Gene Type:ncRNA
CpG%:0.050000
GC%:0.622951
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.