rfhg_210374.1

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Basic information about the TSS


TSS ID:rfhg_210374.1
TSS ID(Version3):hg_180354.1
hg_180355.1
Species:human
Chr:chr19
Start:29213111
End:29213203
Strand:-
Source datasetsFANTOM5|PRJNA401781|PRJNA548673|PRJNA4843412|DRA013844
|PRJDB5282|PRJNA597322|PRJNA615891
ProtocolCAGE|oligo_capping|ReCappable-seq|NETCAGE|C1CAGE|STRIPE-seq
|SLIC_CAGE|TIF-seq2
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3052870,EH38E1947552)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000304863.6:0
BC010035:0
AK291134:0
BC000649:0
GQ901013:0
BC067832:0
GQ900901:0
HQ447986:0
DQ891841:0
GeneID:7386
HGNC/MGI_ID:HGNC:12587
UniProt_ID:A0A384MTZ1 A0A384NPX8 P47985
Nearer transcript ids and distances:
  • LF209742:-21
  • MA445319:-21
view more...
Gene_name:ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
Gene_symbol:UQCRFS1
Gene_synonyms:RIP1 RIS1 RISP UQCR5
Gene_source:HGNC:12587



TATA-Box annotation


Distance to TSS:-6
Nearest PromoterID:NM_006003
Entrez ID:7386
Nearest Unigene:Hs.743307
Nearest Refseq:NM_006003
Nearest Ensembl:ENSG00000169021
Gene Name:ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
Gene Alias:RIP1|RIS1|RISP|UQCR5
Gene Type:protein-coding
CpG%:0.141304
GC%:0.698925
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.