rfhg_210562.1

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Basic information about the TSS


TSS ID:rfhg_210562.1
Species:human
Chr:chr19
Start:33301377
End:33301395
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3056244,EH38E1949610)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF213080:-244
MA448657:-244
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF367535:259
  • MA603112:259
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:1148
Nearest PromoterID:NM_001287424
Entrez ID:1050
Nearest Unigene:Hs.76171
Nearest Refseq:NM_004364
Nearest Ensembl:ENSG00000245848
Gene Name:
Gene Alias:C/EBP-alpha|CEBP
Gene Type:protein-coding
CpG%:0.055556
GC%:0.631579
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):