rfhg_211039.1

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Basic information about the TSS


TSS ID:rfhg_211039.1
Species:human
Chr:chr19
Start:35666516
End:35666518
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000617999.4:0
ENST00000616789.4:0
GeneID:11045
HGNC/MGI_ID:HGNC:12577
UniProt_ID:O00322
Nearer transcript ids and distances:
  • ENST00000379013.6:295
  • ENST00000222275.2:295
  • KJ902190:295
  • KJ898339:295
  • BC107097:295
  • BC107098:295
  • AF085807:300
view more...
Gene_name:uroplakin 1A
Gene_symbol:UPK1A
Gene_synonyms:TSPAN21
Gene_source:HGNC:12577



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NM_001281443
Entrez ID:11045
Nearest Unigene:Hs.159309
Nearest Refseq:NM_007000
Nearest Ensembl:ENSG00000105668
Gene Name:uroplakin 1A
Gene Alias:TSPAN21|UP1A|UPIA|UPKA
Gene Type:protein-coding
CpG%:0.000000
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.