rfhg_21118.1

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Basic information about the TSS


TSS ID:rfhg_21118.1
TSS ID(Version3):hg_17998.1
hg_17999.1
Species:human
Chr:chr1
Start:231528508
End:231528623
Strand:-
Source datasetsFANTOM5|PRJDB5282|PRJNA4843412|DRA013844|PRJNA615891
|PRJNA548673|PRJNA401781
ProtocolCAGE|C1CAGE|NETCAGE|TIF-seq2|SLIC_CAGE|ReCappable-seq
|RAMPAGE|oligo_capping
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2289840,EH38E1431463)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000653908.1:0
ENST00000662216.1:0
ENST00000654602.1:0
ENST00000658645.1:0
ENST00000662999.1:0
ENST00000416221.6:0
ENST00000454631.2:0
ENST00000667843.1:0
ENST00000666601.1:0
NR_173106.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:A0A590UJK7 A0A590UK27
Nearer transcript ids and distances:
  • ENST00000661659.1:8
  • ENST00000653198.1:46
  • ENST00000668147.1:50
  • ENST00000450783.6:140
  • ENST00000425412.2:169
  • ENST00000659999.1:176
  • ENST00000440665.5:253
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-88
Nearest PromoterID:NR_028397
Entrez ID:100303453
Nearest Unigene:Hs.13318
Nearest Refseq:NR_028393
Nearest Ensembl:ENSG00000270106
Gene Name:
Gene Alias:-
Gene Type:ncRNA
CpG%:0.139130
GC%:0.715517
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):