rfhg_211417.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_211417.1
Species:human
Chr:chr19
Start:36489626
End:36489649
Strand:+
Source datasetsPRJNA401781|PRJNA548673
Protocololigo_capping|CAGE|ReCappable-seq
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3058975,EH38E1951601)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000592087.1:0
AK298140:0
GeneID:728752
HGNC/MGI_ID:HGNC:55301
UniProt_ID:B7Z4Z6
Nearer transcript ids and distances:
    Gene_name:ZNF566 antisense RNA 1
    Gene_symbol:ZNF566-AS1
    Gene_synonyms:
    Gene_source:HGNC:55301



    TATA-Box annotation


    Distance to TSS:10
    Nearest PromoterID:NR_036504
    Entrez ID:728752
    Nearest Unigene:Hs.729762
    Nearest Refseq:NR_036504
    Nearest Ensembl:ENSG00000267309
    Gene Name:ZNF566 antisense RNA 1
    Gene Alias:-
    Gene Type:ncRNA
    CpG%:0.086957
    GC%:0.541667
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.