rfhg_215974.1

Basic information about the TSS

---

TSS ID: rfhg_215974.1 TSS ID(Version3): hg_177470.1 Species: human Chr: chr19		Start: 54115732 End: 54115793 Strand: +
Source datasets	FANTOM5|EPD|DBTSS|DRA000914|PRJNA4843412|DRA013844 |PRJDB5282|PRJNA401781|PRJNA548673|PRJNA597322|PRJNA615891
Protocol	CAGE|TSS_database|TSS-seq|NETCAGE|C1CAGE|oligo_capping |RAMPAGE|ReCappable-seq|STRIPE-seq|SLIC_CAGE|TIF-seq2
TSS cluster detected*	15

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

---

Description:	PLS,CTCF-bound (EH38D3074261,EH38E1963934)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

---

Nearest transcript id and distance: ENST00000445811.5:0 ENST00000321030.9:0 ENST00000445124.5:0 AK301709:0 AB593025:0 AK098547:0 AL050369:0 GeneID: 26121 HGNC/MGI_ID: HGNC:15446 UniProt_ID: B4DWW8 E7EN72 E7ESX0 Q8WWY3 Nearer transcript ids and distances: AB593024:8 ENST00000447810.5:16 BC117389:-246 AY040822:-275 DQ426885:-315 ENST00000419967.5:-322 view more...

Gene_name: pre-mRNA processing factor 31 Gene_symbol: PRPF31 Gene_synonyms: NY-BR-99 PRP31 SNRNP61 hPrp31 Gene_source: HGNC:15446

TATA-Box annotation

---

Distance to TSS:	8
Nearest PromoterID:	NM_015629
Entrez ID:	26121
Nearest Unigene:	Hs.515598
Nearest Refseq:	NM_015629
Nearest Ensembl:	ENSG00000105618
Gene Name:	pre-mRNA processing factor 31
Gene Alias:	NY-BR-99|PRP31|RP11|SNRNP61
Gene Type:	protein-coding
CpG%:	0.131148
GC%:	0.612903
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.