rfhg_216435.1

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Basic information about the TSS


TSS ID:rfhg_216435.1
TSS ID(Version3):hg_182826.1
Species:human
Chr:chr19
Start:55461598
End:55461692
Strand:-
Source datasetsFANTOM5|EPD|ENCODE|PRJNA615891|PRJNA597322|PRJDB5282
|PRJNA4843412|DRA013844|PRJNA401781|PRJNA548673
ProtocolCAGE|TSS_database|TIF-seq2|STRIPE-seq|C1CAGE|NETCAGE
|RAMPAGE|oligo_capping|SLIC_CAGE|ReCappable-seq
TSS cluster detected*14

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3075497,EH38E1964889)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000425675.7:0
ENST00000085068.7:0
ENST00000589080.1:0
ENST00000591718.1:0
ENST00000589108.1:0
AK027122:0
AK311540:0
GeneID:79763
HGNC/MGI_ID:HGNC:26278
UniProt_ID:K7ENV7 Q96AB3
Nearer transcript ids and distances:
  • BC017344:29
Gene_name:isochorismatase domain containing 2
Gene_symbol:ISOC2
Gene_synonyms:FLJ23469
Gene_source:HGNC:26278



TATA-Box annotation


Distance to TSS:-3
Nearest PromoterID:NM_001136202
Entrez ID:79763
Nearest Unigene:Hs.467306
Nearest Refseq:NM_024710
Nearest Ensembl:ENSG00000063241
Gene Name:isochorismatase domain containing 2
Gene Alias:-
Gene Type:protein-coding
CpG%:0.074468
GC%:0.652632
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.