rfhg_216435.1
From referenceTSS
Basic information about the TSS
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Source datasets | FANTOM5|EPD|ENCODE|PRJNA615891|PRJNA597322|PRJDB5282 |PRJNA4843412|DRA013844|PRJNA401781|PRJNA548673 | |||||||||||||||
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Protocol | CAGE|TSS_database|TIF-seq2|STRIPE-seq|C1CAGE|NETCAGE |RAMPAGE|oligo_capping|SLIC_CAGE|ReCappable-seq | |||||||||||||||
TSS cluster detected* | 14 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | PLS,CTCF-bound (EH38D3075497,EH38E1964889) |
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Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -3 |
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Nearest PromoterID: | NM_001136202 |
Entrez ID: | 79763 |
Nearest Unigene: | Hs.467306 |
Nearest Refseq: | NM_024710 |
Nearest Ensembl: | ENSG00000063241 |
Gene Name: | isochorismatase domain containing 2 |
Gene Alias: | - |
Gene Type: | protein-coding |
CpG%: | 0.074468 |
GC%: | 0.652632 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.