rfhg_216727.1

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Basic information about the TSS


TSS ID:rfhg_216727.1
TSS ID(Version3):hg_177775.1
Species:human
Chr:chr19
Start:57411147
End:57411182
Strand:+
Source datasetsFANTOM5|EPD|DRA013844|PRJDB5282|PRJNA4843412
ProtocolCAGE|TSS_database|C1CAGE|NETCAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3076781,EH38E1965845)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000307658.12:0
ENST00000599867.1:0
ENST00000595162.5:0
ENST00000601808.1:0
ENST00000595206.1:0
AK127948:0
AK098183:0
GeneID:7565
HGNC/MGI_ID:HGNC:12958
UniProt_ID:M0QZR3 P17021
Nearer transcript ids and distances:
  • AB527348:210
  • BC152892:210
view more...
Gene_name:zinc finger protein 17
Gene_symbol:ZNF17
Gene_synonyms:FLJ40864 FLJ46058 FLJ46615 HPF3 KIAA1947 KOX10
Gene_source:HGNC:12958



TATA-Box annotation


Distance to TSS:3
Nearest PromoterID:NM_006959
Entrez ID:7565
Nearest Unigene:Hs.729403
Nearest Refseq:NM_006959
Nearest Ensembl:ENSG00000186272
Gene Name:zinc finger protein 17
Gene Alias:HPF3|KOX10
Gene Type:protein-coding
CpG%:0.057143
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.