rfhg_219731.1

Basic information about the TSS

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TSS ID: rfhg_219731.1 Species: human Chr: chr20		Start: 34677083 End: 34677120 Strand: -
Source datasets	PRJNA615891|PRJNA401781|PRJNA4843412|DRA013844|PRJNA548673 |PRJNA597322|PRJDB5282
Protocol	TIF-seq2|oligo_capping|SLIC_CAGE|NETCAGE|CAGE |ReCappable-seq|RAMPAGE|STRIPE-seq|C1CAGE
TSS cluster detected*	11

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3294212,EH38E2108601)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000217446.8:0 ENST00000374820.6:0 ENST00000462389.1:0 BC030512:0 AK075507:0 AY358816:0 AB086842:0 AK301900:0 AY339061:0 EU831773:0 EU831851:0 AK308627:0 GeneID: 128869 HGNC/MGI_ID: HGNC:15791 UniProt_ID: B4DXB6 Q9H490 Nearer transcript ids and distances: AY422169:-165

Gene_name: phosphatidylinositol glycan anchor biosynthesis class U Gene_symbol: PIGU Gene_synonyms: GAB1 PIG-U bA346K17.2 Gene_source: HGNC:15791

TATA-Box annotation

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Distance to TSS:	184
Nearest PromoterID:	NM_080476
Entrez ID:	128869
Nearest Unigene:	Hs.253319
Nearest Refseq:	NM_080476
Nearest Ensembl:	ENSG00000101464
Gene Name:	phosphatidylinositol glycan anchor biosynthesis class U
Gene Alias:	CDC91L1|GAB1
Gene Type:	protein-coding
CpG%:	0.135135
GC%:	0.736842
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.