rfhg_219794.1

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Basic information about the TSS


TSS ID:rfhg_219794.1
TSS ID(Version3):hg_187015.1
Species:human
Chr:chr20
Start:34955743
End:34955818
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|ENCODE|PRJDB5282|PRJNA4843412
|DRA013844|PRJNA597322|PRJNA401781|PRJNA548673|PRJNA615891
ProtocolCAGE|TSS_database|C1CAGE|NETCAGE|STRIPE-seq|RAMPAGE
|SLIC_CAGE|TIF-seq2|oligo_capping|ReCappable-seq
TSS cluster detected*15

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3294449,EH38E2108789)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000651619.1:0
ENST00000646735.1:0
ENST00000646405.1:0
ENST00000643908.1:0
ENST00000642498.1:0
ENST00000643443.1:0
ENST00000642538.1:0
ENST00000642493.1:0
ENST00000644197.1:0
ENST00000643690.1:0
ENST00000643628.1:0
ENST00000643203.1:0
ENST00000644608.1:0
BC007927:0
EU668322:0
EU794618:0
U34683:0
AK293144:0
AK312492:0
AK311421:0
AK311567:0
GeneID:2937
HGNC/MGI_ID:HGNC:4624 HGNC:9449
UniProt_ID:A0A0S2Z4J7 A0A2R8Y2F2 A0A2R8Y2X9 A0A2R8Y430 A0A2R8Y446 A0A2R8Y6Y6 B7Z1C5 P48637 V9HWJ1
Nearer transcript ids and distances:
  • ENST00000645723.1:100
  • ENST00000644793.1:108
  • NM_001322495.1:108
  • ENST00000643188.1:-209
  • NM_001322494.1:-209
  • LF350251:210
  • MA585828:210
  • ENST00000646502.1:334
view more...
Gene_name:glutathione synthetase; prion protein
Gene_symbol:GSS PRNP
Gene_synonyms:AltPrP CD230 PRP
Gene_source:HGNC:4624 HGNC:9449



TATA-Box annotation


Distance to TSS:26
Nearest PromoterID:NM_000178
Entrez ID:2937
Nearest Unigene:Hs.82327
Nearest Refseq:NM_000178
Nearest Ensembl:ENSG00000100983
Gene Name:glutathione synthetase; prion protein
Gene Alias:GSHS|HEL-S-64p|HEL-S-88n
Gene Type:protein-coding
CpG%:0.146667
GC%:0.750000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.