rfhg_219989.1

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Basic information about the TSS


TSS ID:rfhg_219989.1
Species:human
Chr:chr20
Start:35954999
End:35955021
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3295418,EH38E2109575)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_016558.4:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000615116.1:-338
  • AF207829:493
  • ENST00000305978.7:497
  • NM_033630.3:497
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:349
Nearest PromoterID:NM_016558
Entrez ID:51282
Nearest Unigene:Hs.584909
Nearest Refseq:NM_016558
Nearest Ensembl:ENSG00000171222
Gene Name:
Gene Alias:RAZ1|SDP1
Gene Type:protein-coding
CpG%:0.090909
GC%:0.565217
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):