rfhg_221009.1

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Basic information about the TSS


TSS ID:rfhg_221009.1
Species:human
Chr:chr20
Start:45308298
End:45308327
Strand:-
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3303573,EH38E2115430)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000360607.10:0
BC141811:0
AK074595:0
AK074597:0
GeneID:8785
HGNC/MGI_ID:HGNC:6910
UniProt_ID:A5D8U1 O95460
Nearer transcript ids and distances:
  • ENST00000353917.10:1
  • BC151219:18
  • LF350537:108
  • MA586114:108
  • ENST00000537548.3:-202
  • NM_003833.5:-202
  • AK074593:-202
view more...
Gene_name:matrilin 4
Gene_symbol:MATN4
Gene_synonyms:
Gene_source:HGNC:6910



TATA-Box annotation


Distance to TSS:-13
Nearest PromoterID:NM_030590
Entrez ID:8785
Nearest Unigene:Hs.278489
Nearest Refseq:NM_003833
Nearest Ensembl:ENSG00000124159
Gene Name:matrilin 4
Gene Alias:-
Gene Type:protein-coding
CpG%:0.068966
GC%:0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.