rfhg_221222.1

Basic information about the TSS

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TSS ID: rfhg_221222.1 TSS ID(Version3): hg_184974.1 Species: human Chr: chr20		Start: 45934673 End: 45934753 Strand: +
Source datasets	FANTOM5|EPD|PRJNA4843412|DRA013844|PRJNA401781|PRJNA615891 |PRJNA548673|PRJDB5282
Protocol	CAGE|TSS_database|NETCAGE|SLIC_CAGE|RAMPAGE|oligo_capping |ReCappable-seq|TIF-seq2|C1CAGE
TSS cluster detected*	12

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3304073,EH38E2115823)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000372409.8:0 ENST00000616084.1:0 AK299435:0 AB050014:0 AK056553:0 BC010005:0 BC013365:0 GeneID: 63935 HGNC/MGI_ID: HGNC:16200 UniProt_ID: B7Z5U5 Q9H4Z3 Nearer transcript ids and distances:

Gene_name: phosphorylated CTD interacting factor 1 Gene_symbol: PCIF1 Gene_synonyms: CAPAM PPP1R121 bA465L10.1 Gene_source: HGNC:16200

TATA-Box annotation

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Distance to TSS:	30
Nearest PromoterID:	NM_022104
Entrez ID:	63935
Nearest Unigene:	Hs.472856
Nearest Refseq:	NM_022104
Nearest Ensembl:	ENSG00000100982
Gene Name:	phosphorylated CTD interacting factor 1
Gene Alias:	C20orf67|CAPAM|PPP1R121|hCAPAM|hPCIF1
Gene Type:	protein-coding
CpG%:	0.150000
GC%:	0.753086
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.