rfhg_222988.1

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Basic information about the TSS


TSS ID:rfhg_222988.1
TSS ID(Version3):hg_185710.1
Species:human
Chr:chr20
Start:62183011
End:62183049
Strand:+
Source datasetsFANTOM5|EPD|PRJNA4843412|DRA013844|PRJDB5282|PRJNA401781
|PRJNA548673|PRJNA615891
ProtocolCAGE|TSS_database|NETCAGE|C1CAGE|RAMPAGE|oligo_capping
|ReCappable-seq|SLIC_CAGE|TIF-seq2
TSS cluster detected*12

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3320043,EH38E2127768)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000370823.8:0
ENST00000466933.1:0
ENST00000471352.5:0
ENST00000467101.5:0
AK316027:0
AK316325:0
AK299189:0
AK299726:0
AK299147:0
GeneID:26164
HGNC/MGI_ID:HGNC:16239
UniProt_ID:B4DRC1 B4DSG2 Q9H4K7
Nearer transcript ids and distances:
  • ENST00000448254.1:2
Gene_name:mitochondrial ribosome associated GTPase 2
Gene_symbol:MTG2
Gene_synonyms:FLJ10741 ObgH1 dJ1005F21.2
Gene_source:HGNC:16239



TATA-Box annotation


Distance to TSS:5
Nearest PromoterID:NM_015666
Entrez ID:26164
Nearest Unigene:Hs.340636
Nearest Refseq:NM_015666
Nearest Ensembl:ENSG00000101181
Gene Name:mitochondrial ribosome associated GTPase 2
Gene Alias:GTPBP5|ObgH1|dJ1005F21.2
Gene Type:protein-coding
CpG%:0.157895
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.