rfhg_223528.1

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Basic information about the TSS


TSS ID:rfhg_223528.1
Species:human
Chr:chr21
Start:5502542
End:5502550
Strand:-
Source datasetsDRA000914
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000624261.1:0
GeneID:105379487
HGNC/MGI_ID:HGNC:52458
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000624859.3:45
  • ENST00000623227.1:45
view more...
Gene_name:long intergenic non-protein coding RNA 1670
Gene_symbol:LINC01670
Gene_synonyms:
Gene_source:HGNC:52458



TATA-Box annotation


Distance to TSS:-51091
Nearest PromoterID:NM_001322047
Entrez ID:102724843
Nearest Unigene:Hs.743984
Nearest Refseq:NM_001322047
Nearest Ensembl:
Gene Name:long intergenic non-protein coding RNA 1670
Gene Alias:-
Gene Type:protein-coding
CpG%:0.125000
GC%:0.555556
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.