rfhg_2260.1

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Basic information about the TSS


TSS ID:rfhg_2260.1
Species:human
Chr:chr1
Start:16499212
End:16499270
Strand:-
Source datasetsPRJNA4843412|DRA013844
ProtocolNETCAGE|CAGE
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2131697,EH38E1322511)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000590118.5:0
ENST00000589964.1:0
GeneID:114819
HGNC/MGI_ID:HGNC:29405
UniProt_ID:
Nearer transcript ids and distances:
  • BC028053:93
Gene_name:CROCC pseudogene 3
Gene_symbol:CROCCP3
Gene_synonyms:KIAA1922
Gene_source:HGNC:29405



TATA-Box annotation


Distance to TSS:-6540
Nearest PromoterID:NR_023386
Entrez ID:114819
Nearest Unigene:Hs.597881
Nearest Refseq:NR_023386
Nearest Ensembl:ENSG00000080947
Gene Name:CROCC pseudogene 3
Gene Alias:CROCCL2|dJ798A10.2
Gene Type:pseudo
CpG%:0.172414
GC%:0.847458
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.