rfhg_226214.1

Basic information about the TSS

TSS ID:	rfhg_226214.1
Species:	human
Chr:	chr21

Start:	39445392
End:	39445392
Strand:	-

Source datasets

PRJNA597322

Protocol

STRIPE-seq

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000438404.5:-327
GeneID:	150082
HGNC/MGI_ID:	HGNC:1255
UniProt_ID:	C9J5D2
Nearer transcript ids and distances:	ENST00000358268.6:-341 ENST00000466954.5:-341 ENST00000411566.5:-341 BC043006:-341 BC026122:-352 ENST00000484878.5:-360 ENST00000451131.1:-360 ENST00000480612.1:-361 ENST00000418018.5:-368 ENST00000459939.5:-369 ENST00000415863.5:-377 ENST00000426783.5:-377 ENST00000490184.5:-383 ENST00000485895.6:-385 ENST00000288350.8:-386 ENST00000448288.6:-386 NM_001384288.1:-386 NM_001384291.1:-386 NM_152505.4:-386 NM_001384293.1:-386 NM_001384295.1:-386 NM_001384294.1:-386 NM_001384289.1:-386 NM_001384286.1:-386 NM_001384296.1:-386 NM_001384285.1:-386 NM_001384287.1:-386 NM_001384292.1:-386 NM_001384303.1:-386 NM_001384301.1:-386 NM_001384307.1:-386 NM_001384297.1:-386 NM_001384305.1:-386 NM_001384312.1:-386 NM_001384299.1:-386 NM_001384300.1:-386 NM_001384313.1:-386 NM_001384306.1:-386 NM_001384310.1:-386 NM_001384309.1:-386 NM_001384298.1:-386 NM_001384308.1:-386 NM_001384302.1:-386 NM_001384304.1:-386 NM_001384311.1:-386 ENST00000456017.5:-388 ENST00000434281.5:-411 ENST00000491625.5:-413 view more...

Gene_name:	lebercilin LCA5 like
Gene_symbol:	LCA5L
Gene_synonyms:	MGC33295
Gene_source:	HGNC:1255

TATA-Box annotation

Distance to TSS:	-473
Nearest PromoterID:	NM_001317742
Entrez ID:	6450
Nearest Unigene:	Hs.473847
Nearest Refseq:	NM_007341
Nearest Ensembl:	ENSG00000185437
Gene Name:	lebercilin LCA5 like
Gene Alias:	21-GARP
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "ENST00000358268.6:-341 ENST00000466954.5:-341 ENST00000411566.5:-341 BC043006:-341 BC026122:-352 ENST00000484878.5:-360 ENST00000451131.1:-360 ENST00000480612.1:-361 ENST00000418018.5:-368 ENST00000459939.5:-369 ENST00000415863.5:-377 ENST00000426783.5:-377 ENST00000490184.5:-383 ENST00000485895.6:-385 ENST00000288350.8:-386 ENST00000448288.6:-386 NM_001384288.1:-386 NM_001384291.1:-386 NM_152505.4:-386 NM_001384293.1:-386 NM_001384295.1:-386 NM_001384294.1:-386 NM_001384289.1:-386 NM_001384286.1:-386 NM_001384296.1:-386 NM_001384285.1:-386 NM_001384287.1:-386 NM_001384292.1:-386 NM_001384303.1:-386 NM_001384301.1:-386 NM_001384307.1:-386 NM_001384297.1:-386 NM_001384305.1:-386 NM_001384312.1:-386 NM_001384299.1:-386 NM_001384300.1:-386 NM_001384313.1:-386 NM_001384306.1:-386 NM_001384310.1:-386 NM_001384309.1:-386 NM_001384298.1:-386 NM_001384308.1:-386 NM_001384302.1:-386 NM_001384304.1:-386 NM_001384311.1:-386 ENST00000456017.5:-388 ENST00000434281.5:-411 ENST00000491625.5:-413" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.