rfhg_22626.1

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Basic information about the TSS


TSS ID:rfhg_22626.1
TSS ID(Version3):hg_26710.1
Species:human
Chr:chr2
Start:3377805
End:3377882
Strand:-
Source datasetsFANTOM5|EPD|DBTSS|PRJNA401781|PRJNA615891|PRJNA548673
|PRJNA4843412|DRA013844|PRJDB5282
ProtocolCAGE|TSS_database|TSS-seq|RAMPAGE|TIF-seq2|oligo_capping
|ReCappable-seq|SLIC_CAGE|NETCAGE|C1CAGE
TSS cluster detected*13

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3080642,EH38E1968370)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000398659.8:0
ENST00000382125.9:0
ENST00000444776.1:0
AK222652:0
AK026522:0
AF019952:0
GeneID:7260
HGNC/MGI_ID:HGNC:12383
UniProt_ID:A8MUM1 C9J0U9 Q53HC9
Nearer transcript ids and distances:
  • ENST00000441271.1:5
  • ENST00000406835.6:12
  • ENST00000443925.6:15
  • BC002485:15
  • ENST00000455162.5:17
  • ENST00000435721.5:24
  • KJ892325:114
  • CU677984:114
  • DQ892693:115
  • DQ895936:115
  • ENST00000463662.5:335
view more...
Gene_name:EARP complex and GARP complex interacting protein 1
Gene_symbol:EIPR1
Gene_synonyms:EIPR-1
Gene_source:HGNC:12383



TATA-Box annotation


Distance to TSS:-25
Nearest PromoterID:NM_001330531
Entrez ID:7260
Nearest Unigene:Hs.502770
Nearest Refseq:NM_003310
Nearest Ensembl:ENSG00000032389
Gene Name:EARP complex and GARP complex interacting protein 1
Gene Alias:EIPR-1|TSSC1
Gene Type:protein-coding
CpG%:0.038961
GC%:0.487179
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.