rfhg_22653.1

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Basic information about the TSS


TSS ID:rfhg_22653.1
Species:human
Chr:chr2
Start:3558526
End:3558579
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3080830,EH38E1968531)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000426725.1:0
AK023018:0
GeneID:100506054
HGNC/MGI_ID:HGNC:49289
UniProt_ID:
Nearer transcript ids and distances:
  • BC040057:-34
  • ENST00000438436.3:49
  • ENST00000664922.1:-52
  • NR_038431.1:-139
  • NR_038430.1:-139
  • NR_038429.1:-140
  • BC019594:304
view more...
Gene_name:RNASEH1 divergent transcript
Gene_symbol:RNASEH1-DT
Gene_synonyms:LOC100506054
Gene_source:HGNC:49289



TATA-Box annotation


Distance to TSS:165
Nearest PromoterID:NR_038431
Entrez ID:100506054
Nearest Unigene:Hs.606550
Nearest Refseq:NR_038429
Nearest Ensembl:ENSG00000234171
Gene Name:RNASEH1 divergent transcript
Gene Alias:-
Gene Type:ncRNA
CpG%:0.056604
GC%:0.759259
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.