rfhg_227571.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_227571.1
Species:human
Chr:chr22
Start:18906278
End:18906291
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AF228707:0
GeneID:8214
HGNC/MGI_ID:HGNC:2846
UniProt_ID:
Nearer transcript ids and distances:
  • AK315115:27
  • ENST00000331444.12:29
  • NM_005675.6:29
  • ENST00000483718.5:34
  • BC047039:39
  • ENST00000638240.1:-40
  • ENST00000427407.5:60
  • ENST00000608842.1:62
  • CR456434:62
  • ENST00000480608.5:64
  • AK098780:64
  • AB528122:80
  • CU013282:82
  • CU012994:82
  • KJ535003:84
  • KJ534820:84
  • KJ534971:84
  • KJ535013:84
  • KJ535027:84
  • KJ535047:84
  • X96484:119
  • ENST00000413981.5:-250
  • BC033306:-250
  • ENST00000477156.1:490
view more...
Gene_name:DiGeorge syndrome critical region gene 6
Gene_symbol:DGCR6
Gene_synonyms:
Gene_source:HGNC:2846



TATA-Box annotation


Distance to TSS:-36
Nearest PromoterID:NM_005675
Entrez ID:8214
Nearest Unigene:Hs.474185
Nearest Refseq:NM_005675
Nearest Ensembl:ENSG00000183628
Gene Name:DiGeorge syndrome critical region gene 6
Gene Alias:-
Gene Type:protein-coding
CpG%:0.000000
GC%:0.428571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "AK315115:27 ENST00000331444.12:29 NM_005675.6:29 ENST00000483718.5:34 BC047039:39 ENST00000638240.1:-40 ENST00000427407.5:60 ENST00000608842.1:62 CR456434:62 ENST00000480608.5:64 AK098780:64 AB528122:80 CU013282:82 CU012994:82 KJ535003:84 KJ534820:84 KJ534971:84 KJ535013:84 KJ535027:84 KJ535047:84 X96484:119 ENST00000413981.5:-250 BC033306:-250 ENST00000477156.1:490" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.