rfhg_227643.1

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Basic information about the TSS


TSS ID:rfhg_227643.1
Species:human
Chr:chr22
Start:19448247
End:19448252
Strand:-
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3352292,EH38E2149656)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK290073:42
GeneID:128977
HGNC/MGI_ID:HGNC:27012
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:chromosome 22 open reading frame 39
    Gene_symbol:C22orf39
    Gene_synonyms:MGC74441
    Gene_source:HGNC:27012



    TATA-Box annotation


    Distance to TSS:-17
    Nearest PromoterID:NM_001166242
    Entrez ID:128977
    Nearest Unigene:Hs.659565
    Nearest Refseq:NM_173793
    Nearest Ensembl:ENSG00000242259
    Gene Name:chromosome 22 open reading frame 39
    Gene Alias:-
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.333333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.