rfhg_228715.1

Basic information about the TSS

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TSS ID: rfhg_228715.1 TSS ID(Version3): hg_193506.1 hg_193503.1 hg_239341.1 hg_193504.1 hg_193505.1 Species: human Chr: chr22		Start: 28800491 End: 28800599 Strand: -
Source datasets	DBTSS|PRJNA4843412|PRJNA615891|DRA013844|PRJNA401781 |PRJNA548673|PRJNA597322
Protocol	TSS-seq|NETCAGE|TIF-seq2|SLIC_CAGE|CAGE|oligo_capping |ReCappable-seq|STRIPE-seq
TSS cluster detected*	10

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3361629,EH38E2156409)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000216037.10:0 ENST00000403532.7:0 ENST00000611155.4:0 ENST00000344347.5:0 ENST00000482720.1:0 M31627:0 BC000938:0 BC012841:0 AB076383:0 AB076384:0 AK292188:0 CR456611:0 CU013207:0 AK313761:0 DQ890989:0 DQ894165:0 AB463352:0 AM393640:0 CU013495:0 CU674466:0 GeneID: 7494 HGNC/MGI_ID: HGNC:12801 HGNC:12802 UniProt_ID: A0A024R1F0 A8K823 B1AHH2 P17861 Nearer transcript ids and distances: BC015709:26 ENST00000405219.7:358 NM_001394000.1:414 NM_001393999.1:414 view more...

Gene_name: X-box binding protein 1; X-box binding protein 1 pseudogene 1 Gene_symbol: XBP1 XBP1P1 Gene_synonyms: Gene_source: HGNC:12801 HGNC:12802

TATA-Box annotation

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Distance to TSS:	27
Nearest PromoterID:	NM_001079539
Entrez ID:	7494
Nearest Unigene:	Hs.437638
Nearest Refseq:	NM_005080
Nearest Ensembl:	ENSG00000100219
Gene Name:	X-box binding protein 1; X-box binding protein 1 pseudogene 1
Gene Alias:	TREB-5|TREB5|XBP-1|XBP2
Gene Type:	protein-coding
CpG%:	0.166667
GC%:	0.770642
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.