rfhg_230508.1

Basic information about the TSS

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TSS ID: rfhg_230508.1 Species: human Chr: chr22		Start: 39399744 End: 39399806 Strand: +
Source datasets	PRJNA4843412|DRA013844|PRJDB5282|PRJNA615891|PRJNA401781 |PRJNA548673
Protocol	NETCAGE|CAGE|C1CAGE|SLIC_CAGE|TIF-seq2|RAMPAGE |oligo_capping|ReCappable-seq
TSS cluster detected*	10

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3372459,EH38E2164659)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000473613.5:0 ENST00000216160.11:0 ENST00000331454.3:0 AK296314:0 BC038582:0 AF425640:0 AK312456:0 U49928:0 AK291668:0 AK316004:0 AK308903:0 GeneID: 10454 HGNC/MGI_ID: HGNC:18157 UniProt_ID: A8K6K3 B7Z3S5 B7Z9N9 Q15750 Nearer transcript ids and distances: BC050554:-3

Gene_name: TGF-beta activated kinase 1 (MAP3K7) binding protein 1 Gene_symbol: TAB1 Gene_synonyms: Gene_source: HGNC:18157

TATA-Box annotation

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Distance to TSS:	-5
Nearest PromoterID:	NM_006116
Entrez ID:	10454
Nearest Unigene:	Hs.507681
Nearest Refseq:	NM_006116
Nearest Ensembl:	ENSG00000100324
Gene Name:	TGF-beta activated kinase 1 (MAP3K7) binding protein 1
Gene Alias:	3'-Tab1|MAP3K7IP1
Gene Type:	protein-coding
CpG%:	0.096774
GC%:	0.730159
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.