rfhg_230951.1

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Basic information about the TSS


TSS ID:rfhg_230951.1
TSS ID(Version3):hg_194422.1
hg_194421.1
Species:human
Chr:chr22
Start:42270588
End:42270667
Strand:-
Source datasetsFANTOM5|ENCODE|PRJNA4843412|DRA013844
ProtocolCAGE|NETCAGE
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3375388,EH38E2167004)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000677622.1:0
GeneID:6942
HGNC/MGI_ID:HGNC:11631
UniProt_ID:W5ZR30
Nearer transcript ids and distances:
    Gene_name:transcription factor 20
    Gene_symbol:TCF20
    Gene_synonyms:AR1 SPBP
    Gene_source:HGNC:11631



    TATA-Box annotation


    Distance to TSS:874
    Nearest PromoterID:NR_036498
    Entrez ID:388906
    Nearest Unigene:Hs.730075
    Nearest Refseq:NR_036498
    Nearest Ensembl:
    Gene Name:transcription factor 20
    Gene Alias:-
    Gene Type:pseudo
    CpG%:0.050633
    GC%:0.562500
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.