rfhg_233841.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_233841.1
Species:human
Chr:chrX
Start:4544997
End:4545021
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:EU195219:78
GeneID:100616461
HGNC/MGI_ID:HGNC:39054
UniProt_ID:
Nearer transcript ids and distances:
  • EU195218:-487
Gene_name:endogenous retrovirus group H member 2
Gene_symbol:ERVH-2
Gene_synonyms:HERV-HX
Gene_source:HGNC:39054



TATA-Box annotation


Distance to TSS:88563
Nearest PromoterID:NR_110390
Entrez ID:101928201
Nearest Unigene:Hs.586488
Nearest Refseq:NR_110390
Nearest Ensembl:ENSG00000236513
Gene Name:endogenous retrovirus group H member 2
Gene Alias:-
Gene Type:ncRNA
CpG%:0.000000
GC%:0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.